Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine aminotransferase | ALQ79_01624 | Not Available | Positive | 5328318 - 5329466 | 42398.5 |
| hypothetical protein | ALQ79_01625 | Not Available | Positive | 5329822 - 5330283 | 15465.9 |
| oxaloacetate decarboxylase | ALQ79_01626 | Not Available | Negative | 5330523 - 5331392 | 31351.4 |
| 2-isopropylmalate synthase | ALQ79_01627 | Not Available | Negative | 5331750 - 5333420 | 61532.6 |
| m24/m37 family peptidase | ALQ79_01628 | Not Available | Negative | 5333790 - 5334614 | 29471.7 |
| exodeoxyribonuclease 7 large subunit | ALQ79_01629 | Not Available | Negative | 5334622 - 5336037 | 52576.8 |
| hypothetical protein | ALQ79_01630 | Not Available | Positive | 5336133 - 5336681 | 20659.6 |
| hypothetical protein | ALQ79_101268 | Not Available | Negative | 5336608 - 5336793 | 6931.11 |
| inosine-5'-monophosphate dehydrogenase | ALQ79_01631 | Not Available | Positive | 5336776 - 5338245 | 51976.0 |
| gmp synthase | ALQ79_01632 | Not Available | Positive | 5338351 - 5339928 | 58147.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







