Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inositol-1-monophosphatase | ALQ79_01605 | Not Available | Negative | 5310505 - 5311320 | 29573.3 |
| rna methyltransferase | ALQ79_01606 | Not Available | Positive | 5311536 - 5312309 | 27904.4 |
| serine acetyltransferase | ALQ79_01607 | Not Available | Positive | 5312309 - 5313085 | 28129.9 |
| iron-sulfur cluster assembly protein transcriptoinal regulator iscr | ALQ79_100188 | Not Available | Positive | 5313244 - 5313735 | 17899.4 |
| cysteine desulfurase iscs | ALQ79_01608 | Not Available | Positive | 5313780 - 5314994 | 44441.0 |
| scaffold protein | ALQ79_01609 | Not Available | Positive | 5315077 - 5315463 | 13856.6 |
| hesb/yadr/yfhf:iron-sulfur cluster assembly protein isca | ALQ79_01610 | Not Available | Positive | 5315535 - 5315858 | 11547.6 |
| co-chaperone protein hscb -like protein | ALQ79_01611 | Not Available | Positive | 5315869 - 5316390 | 20257.9 |
| chaperone protein hsca -like protein | ALQ79_01612 | Not Available | Positive | 5316417 - 5318297 | 67239.5 |
| ferredoxin, 2fe-2s type, isc system | ALQ79_01613 | Not Available | Positive | 5318301 - 5318642 | 12258.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







