Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| taurine dioxygenase | ALQ79_03264 | Not Available | Positive | 5205022 - 5205891 | 32056.4 |
| acetyltransferase | ALQ79_03265 | Not Available | Negative | 5205933 - 5206448 | 19552.4 |
| hypothetical protein | ALQ79_03266 | Not Available | Positive | 5206602 - 5207729 | 40434.9 |
| hypothetical protein | ALQ79_100453 | Not Available | Positive | 5207735 - 5207845 | 3816.62 |
| methyl-accepting chemotaxis protein | ALQ79_03267 | Not Available | Positive | 5207998 - 5209926 | 68143.4 |
| membrane protein | ALQ79_03268 | Not Available | Negative | 5209957 - 5210889 | 33094.6 |
| transcriptional regulator, lysr family | ALQ79_03269 | Not Available | Positive | 5210964 - 5211818 | 30614.2 |
| plasmid stabilization system protein | ALQ79_100749 | Not Available | Negative | 5211855 - 5212139 | 10647.9 |
| 1-aminocyclopropane-1-carboxylate deaminase | ALQ79_03270 | Not Available | Negative | 5212528 - 5213544 | 36853.1 |
| transcriptional regulator, asnc family | ALQ79_03271 | Not Available | Positive | 5213719 - 5214237 | 19088.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







