Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ispsy3, transposase | ALQ79_05013 | Not Available | Positive | 5150787 - 5151878 | 42395.3 |
| phosphate transporter | ALQ79_03239 | Not Available | Negative | 5152127 - 5153743 | 56728.9 |
| cation transporter | ALQ79_03240 | Not Available | Negative | 5153860 - 5154879 | 38457.3 |
| aldo/keto reductase family oxidoreductase | ALQ79_03241 | Not Available | Negative | 5155050 - 5155871 | 30293.5 |
| histidine kinase, hamp region: chemotaxis sensory transducer | ALQ79_100510 | Not Available | Negative | 5155975 - 5157708 | 62692.3 |
| tetr family transcriptional regulator | ALQ79_03242 | Not Available | Negative | 5157962 - 5158570 | 22544.7 |
| sensory box sensor histidine kinase/response regulator | ALQ79_05280 | Not Available | Negative | 5158677 - 5161586 | 107405.0 |
| transcriptional regulator, tetr family | ALQ79_03244 | Not Available | Positive | 5161889 - 5162542 | 24058.1 |
| beta-glucosidase | ALQ79_05283 | Not Available | Negative | 5162633 - 5165386 | 100103.0 |
| hypothetical protein | ALQ79_03246 | Not Available | Negative | 5165383 - 5165631 | 8402.77 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







