Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ispsy19, transposase | ALQ79_04941 | Not Available | Positive | 5139845 - 5140921 | 40583.2 |
| hypothetical protein | ALQ79_102679 | Not Available | Negative | 5140958 - 5141089 | 5126.31 |
| plasmid-related protein | ALQ79_01888 | Not Available | Positive | 5141143 - 5141331 | 7271.77 |
| xami dna methyltransferase | ALQ79_100900 | Not Available | Positive | 5141328 - 5142914 | 57687.9 |
| hydroxyglutarate oxidase | ALQ79_01523 | Not Available | Positive | 5144609 - 5145447 | 30151.3 |
| major facilitator family transporter | ALQ79_01524 | Not Available | Positive | 5145477 - 5146838 | 48385.1 |
| hypothetical protein | ALQ79_102090 | Not Available | Positive | 5146869 - 5147303 | 17144.8 |
| hypothetical protein | ALQ79_101999 | Not Available | Negative | 5147306 - 5147698 | 14881.3 |
| hypothetical protein | ALQ79_05628 | Not Available | Positive | 5148424 - 5150096 | 61787.9 |
| dna topoisomerase | ALQ79_05067 | Not Available | Negative | 5150097 - 5150451 | 13230.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







