Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| extracellular ligand-binding receptor | ALQ79_00273 | Not Available | Positive | 5124782 - 5125963 | 42567.2 |
| inner-membrane translocator | ALQ79_00274 | Not Available | Positive | 5126030 - 5126932 | 32903.3 |
| branched-chain amino acid abc transporter permease | ALQ79_00275 | Not Available | Positive | 5126934 - 5128076 | 41197.4 |
| abc transporter | ALQ79_00276 | Not Available | Positive | 5128073 - 5128810 | 27041.9 |
| abc transporter | ALQ79_00277 | Not Available | Positive | 5128813 - 5129502 | 25284.9 |
| urease accessory protein uree | ALQ79_00278 | Not Available | Positive | 5129525 - 5129965 | 16225.5 |
| urease accessory protein uref | ALQ79_00279 | Not Available | Positive | 5129956 - 5130693 | 26774.4 |
| urease subunit alpha | ALQ79_00280 | Not Available | Positive | 5130721 - 5131416 | 25041.0 |
| urease subunit alpha | ALQ79_00281 | Not Available | Positive | 5131420 - 5133132 | 61204.5 |
| urease accessory protein ureg | ALQ79_00282 | Not Available | Positive | 5133159 - 5133821 | 23673.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







