Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALQ79_00266 | Not Available | Negative | 5112138 - 5112269 | 4738.53 |
| chew domain-containing protein | ALQ79_04545 | Not Available | Negative | 5112329 - 5113828 | 53807.3 |
| methyl-accepting chemotaxis transducer/sensory box protein | ALQ79_100742 | Not Available | Negative | 5113807 - 5115963 | 81186.1 |
| hypothetical protein | ALQ79_101349 | Not Available | Negative | 5116607 - 5116732 | 4802.01 |
| coenzyme -dependent n5,n10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductase | ALQ79_100163 | Not Available | Positive | 5117089 - 5118435 | 49857.4 |
| d-isomer specific 2-hydroxyacid dehydrogenase protein | ALQ79_00268 | Not Available | Positive | 5118432 - 5119391 | 34205.7 |
| aliphatic sulfonate abc transporter periplasmic substrate-binding protein | ALQ79_00269 | Not Available | Positive | 5119468 - 5120442 | 35113.1 |
| amidase | ALQ79_00270 | Not Available | Negative | 5120503 - 5122173 | 58502.7 |
| putative transcription antitermination protein | ALQ79_00271 | Not Available | Negative | 5122262 - 5122894 | 23404.7 |
| regulatory protein | ALQ79_00272 | Not Available | Negative | 5122891 - 5124039 | 42742.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







