Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv pilus bioproteinsis protein pili | ALQ79_03236 | Not Available | Positive | 5075674 - 5076213 | 20249.6 |
| type iv pilus bioproteinsis protein pilj | ALQ79_03237 | Not Available | Positive | 5076262 - 5078304 | 73070.4 |
| sensor histidine kinase/response regulator | ALQ79_03238 | Not Available | Positive | 5078352 - 5084312 | 218453.0 |
| chew domain protein | ALQ79_100046 | Not Available | Positive | 5084305 - 5084775 | 16856.3 |
| hypothetical protein | ALQ79_200368 | Not Available | Positive | 5085261 - 5085734 | 18185.3 |
| yebg protein | ALQ79_01805 | Not Available | Negative | 5086040 - 5086306 | 9685.39 |
| psie protein | ALQ79_01806 | Not Available | Positive | 5086735 - 5087223 | 17710.9 |
| putative lipoprotein | ALQ79_100112 | Not Available | Negative | 5087283 - 5087615 | 12926.2 |
| hypothetical protein | ALQ79_101556 | Not Available | Negative | 5087767 - 5087904 | 5091.19 |
| hypothetical protein | ALQ79_01807 | Not Available | Negative | 5087954 - 5088295 | 12201.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







