Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative peptidase protein | ALQ79_03051 | Not Available | Negative | 5046259 - 5047245 | 35613.0 |
| hypothetical protein | ALQ79_03052 | Not Available | Negative | 5047900 - 5048406 | 19212.5 |
| hydroxypyruvate isomerase | ALQ79_03211 | Not Available | Negative | 5050033 - 5050818 | 29035.3 |
| gluconate transporter protein | ALQ79_05268 | Not Available | Negative | 5050841 - 5052424 | 55369.9 |
| putative aldolase | ALQ79_03213 | Not Available | Negative | 5052434 - 5053072 | 23256.0 |
| hopan1 protein | ALQ79_03214 | Not Available | Negative | 5053072 - 5054361 | 44419.4 |
| putative 3-hydroxyisobutyrate dehydrogenase | ALQ79_03215 | Not Available | Negative | 5054372 - 5055277 | 30996.6 |
| hypothetical protein | ALQ79_03216 | Not Available | Negative | 5055505 - 5055960 | 17139.8 |
| aminotransferase, ses i and ii | ALQ79_100221 | Not Available | Negative | 5056135 - 5057463 | 49331.8 |
| dihydroxy-acid dehydratase | ALQ79_05270 | Not Available | Positive | 5057531 - 5059528 | 71346.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







