Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione peroxidase | ALQ79_01991 | Not Available | Positive | 5003322 - 5003810 | 17850.8 |
| sensor histidine kinase/response regulator | ALQ79_04968 | Not Available | Negative | 5003817 - 5006165 | 86240.8 |
| hypothetical protein | ALQ79_01993 | Not Available | Positive | 5006246 - 5007136 | 33868.1 |
| gaf domain-containing protein | ALQ79_01994 | Not Available | Positive | 5007133 - 5007615 | 17187.3 |
| hypothetical protein | ALQ79_01995 | Not Available | Negative | 5007670 - 5008440 | 28874.1 |
| major facilitator family transporter | ALQ79_04853 | Not Available | Negative | 5008774 - 5010153 | 49799.9 |
| ggdef domain/eal domain-containing protein | ALQ79_01535 | Not Available | Positive | 5010386 - 5012677 | 84687.5 |
| hypothetical protein | ALQ79_01536 | Not Available | Negative | 5012792 - 5013106 | 11420.7 |
| high-affinity branched-chain amino acid abc transporter | ALQ79_04854 | Not Available | Positive | 5013379 - 5014548 | 41267.2 |
| high-affinity branched-chain amino acid abc transporter | ALQ79_01537 | Not Available | Positive | 5014776 - 5015699 | 32186.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







