Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALQ79_01983 | Not Available | Negative | 4994107 - 4994292 | 7235.65 |
| hypothetical protein | ALQ79_01984 | Not Available | Positive | 4994360 - 4994593 | 9073.98 |
| 3-deoxy-7-phosphoheptulonate synthase | ALQ79_01985 | Not Available | Negative | 4994612 - 4995958 | 49954.5 |
| hypothetical protein | ALQ79_01986 | Not Available | Positive | 4996130 - 4996891 | 28317.8 |
| atp-dependent rna helicase dead | ALQ79_01987 | Not Available | Positive | 4997346 - 4999025 | 60939.8 |
| extradiol-type ring-opening dioxygenase | ALQ79_01988 | Not Available | Negative | 4999130 - 4999897 | 27685.0 |
| hypothetical protein | ALQ79_01989 | Not Available | Negative | 4999987 - 5000169 | 6577.33 |
| protease htpx | ALQ79_01990 | Not Available | Negative | 5000222 - 5001109 | 32286.7 |
| aminotransferase, ses i and ii | ALQ79_04961 | Not Available | Negative | 5001377 - 5002819 | 53137.0 |
| peptide methionine sulfoxide reductase msrb | ALQ79_04964 | Not Available | Positive | 5002593 - 5003174 | 21516.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







