Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| autotransporter | ALQ79_05008 | Not Available | Negative | 4970559 - 4973696 | 108196.0 |
| putative lipoprotein | ALQ79_02179 | Not Available | Positive | 4973906 - 4974406 | 18139.7 |
| tray protein | ALQ79_05157 | Not Available | Positive | 4975223 - 4975647 | 14778.0 |
| laci transcriptional regulator | ALQ79_01580 | Not Available | Positive | 4976369 - 4977382 | 36559.7 |
| periplasmic binding protein/laci transcriptional regulator | ALQ79_01581 | Not Available | Positive | 4977572 - 4978585 | 35383.5 |
| abc transporter | ALQ79_01582 | Not Available | Positive | 4978597 - 4979373 | 27800.0 |
| inner-membrane translocator | ALQ79_01583 | Not Available | Positive | 4979388 - 4980407 | 35357.6 |
| phosphotriesterase protein | ALQ79_100397 | Not Available | Positive | 4980404 - 4981519 | 40691.7 |
| hypothetical protein | ALQ79_01584 | Not Available | Positive | 4981516 - 4982271 | 28197.5 |
| peptidase m20:peptidase m20 | ALQ79_04865 | Not Available | Positive | 4982284 - 4983447 | 41294.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







