Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | ALQ79_100142 | Not Available | Negative | 4923064 - 4924383 | 49112.6 |
| two-component dna-binding response regulator colr | ALQ79_00336 | Not Available | Negative | 4924343 - 4925026 | 25473.0 |
| pap2 super protein | ALQ79_00337 | Not Available | Positive | 4925204 - 4925944 | 27421.9 |
| 60 kda chaperonin | ALQ79_04560 | Not Available | Negative | 4926025 - 4927686 | 57887.2 |
| 10 kda chaperonin | ALQ79_00339 | Not Available | Negative | 4927718 - 4928011 | 10268.4 |
| phage t7 f exclusion suppressor fxsa | ALQ79_04561 | Not Available | Negative | 4928266 - 4928763 | 18495.2 |
| 3-ketoacyl- reductase | ALQ79_00341 | Not Available | Positive | 4929027 - 4929797 | 27327.3 |
| hypothetical protein | ALQ79_00342 | Not Available | Negative | 4929851 - 4930858 | 37508.9 |
| mgmt protein | ALQ79_00343 | Not Available | Positive | 4931023 - 4931379 | 12803.5 |
| putative ampg protein | ALQ79_100455 | Not Available | Positive | 4931434 - 4932984 | 56439.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







