Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ggdef domain/eal domain-containing protein | ALQ79_00327 | Not Available | Positive | 4912972 - 4915023 | 77114.0 |
| hypothetical protein | ALQ79_100973 | Not Available | Positive | 4915102 - 4915221 | 4633.62 |
| putative lipoprotein | ALQ79_00328 | Not Available | Positive | 4915193 - 4916551 | 47166.8 |
| pyridoxamine 5'-phosphate oxidase protein | ALQ79_00329 | Not Available | Negative | 4916677 - 4917306 | 22837.3 |
| putative lipoprotein | ALQ79_00330 | Not Available | Positive | 4917513 - 4918940 | 51475.6 |
| putative lipoprotein | ALQ79_00331 | Not Available | Positive | 4919019 - 4920083 | 38671.2 |
| hypothetical protein | ALQ79_00332 | Not Available | Positive | 4920097 - 4921206 | 40468.6 |
| hypothetical protein | ALQ79_00333 | Not Available | Negative | 4921231 - 4921458 | 8027.91 |
| inaa protein | ALQ79_00334 | Not Available | Negative | 4921455 - 4922177 | 27234.5 |
| hypothetical protein | ALQ79_00335 | Not Available | Negative | 4922182 - 4922862 | 26212.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







