Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| major facilitator family transporter | ALQ79_00318 | Not Available | Positive | 4904990 - 4906156 | 39822.0 |
| xenobiotic reductase b | ALQ79_00319 | Not Available | Positive | 4906178 - 4906627 | 16149.5 |
| hypothetical protein | ALQ79_102879 | Not Available | Negative | 4906578 - 4906697 | 4122.89 |
| xenobiotic reductase b | ALQ79_00320 | Not Available | Positive | 4906686 - 4907228 | 19871.3 |
| hypothetical protein | ALQ79_00321 | Not Available | Negative | 4907300 - 4908061 | 26852.1 |
| hypothetical protein | ALQ79_00322 | Not Available | Negative | 4908210 - 4909061 | 30908.2 |
| 3-beta hydroxysteroid dehydrogenase/isomerase protein | ALQ79_00323 | Not Available | Negative | 4909146 - 4910138 | 37068.8 |
| chromosome replication initiation inhibitor protein | ALQ79_04558 | Not Available | Negative | 4910213 - 4911163 | 34994.4 |
| amino acid transporter lyse | ALQ79_00325 | Not Available | Positive | 4911207 - 4911809 | 21335.6 |
| superoxide dismutase | ALQ79_00326 | Not Available | Positive | 4912002 - 4912583 | 21377.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







