Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative atp-dependent rna helicase rhle | ALQ79_04454 | Not Available | Positive | 4874613 - 4875965 | 49501.4 |
| pyridine nucleotide-disulfide oxidoreductase domain-containing protein | ALQ79_04455 | Not Available | Negative | 4876189 - 4877463 | 45132.7 |
| histone deacetylase protein | ALQ79_05601 | Not Available | Negative | 4877534 - 4878481 | 35249.1 |
| acetyltransferase | ALQ79_04457 | Not Available | Positive | 4878572 - 4879141 | 21401.8 |
| acyl-coa thioesterase ii | ALQ79_04458 | Not Available | Positive | 4879281 - 4880150 | 32760.7 |
| had family hydrolase | ALQ79_100073 | Not Available | Positive | 4880147 - 4880737 | 21582.0 |
| hypothetical protein | ALQ79_05602 | Not Available | Negative | 4880978 - 4882141 | 43093.0 |
| metallopeptidase, zinc binding protein | ALQ79_04460 | Not Available | Negative | 4881972 - 4882859 | 31625.1 |
| membrane protein | ALQ79_100125 | Not Available | Negative | 4882996 - 4884306 | 46352.9 |
| trna/tmrna -methyltransferase | ALQ79_100251 | Not Available | Negative | 4884506 - 4885792 | 48696.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







