Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALQ79_04445 | Not Available | Negative | 4867001 - 4867306 | 11152.4 |
| hypothetical protein | ALQ79_102286 | Not Available | Negative | 4867431 - 4867565 | 5257.5 |
| hypothetical protein | ALQ79_04446 | Not Available | Positive | 4867510 - 4868322 | 30855.0 |
| hypothetical protein | ALQ79_04447 | Not Available | Negative | 4868444 - 4868845 | 14742.8 |
| endonuclease/exonuclease/phosphatase | ALQ79_04448 | Not Available | Negative | 4868894 - 4870036 | 42875.5 |
| hypothetical protein | ALQ79_04449 | Not Available | Negative | 4870070 - 4870732 | 24512.8 |
| putative periplasmic ligand-binding sensor protein | ALQ79_102268 | Not Available | Positive | 4870924 - 4871640 | 24647.1 |
| dna polymerase iii alpha subunit | ALQ79_04451 | Not Available | Positive | 4872406 - 4873020 | 22443.3 |
| transcription regulator asnc | ALQ79_04452 | Not Available | Negative | 4873025 - 4873492 | 17144.8 |
| putative dmt superfamily transporter inner membrane protein | ALQ79_04453 | Not Available | Positive | 4873660 - 4874574 | 31999.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







