Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALQ79_02018 | Not Available | Negative | 4855632 - 4856270 | 23988.3 |
| putative lipoprotein | ALQ79_02019 | Not Available | Negative | 4856209 - 4856736 | 19495.8 |
| hypothetical protein | ALQ79_02710 | Not Available | Positive | 4856801 - 4857239 | 16496.7 |
| type iv fimbriae expression regulatory protein pilr | ALQ79_00987 | Not Available | Negative | 4857372 - 4858709 | 49849.9 |
| type iv pilus sensor protein pils | ALQ79_04714 | Not Available | Negative | 4858712 - 4860343 | 59611.4 |
| pseudouridine synthase | ALQ79_00989 | Not Available | Positive | 4861835 - 4862797 | 35502.9 |
| multicopper polyphenol oxidase | ALQ79_00990 | Not Available | Positive | 4862794 - 4863522 | 25871.5 |
| clpb protein | ALQ79_00991 | Not Available | Positive | 4863693 - 4866257 | 95195.8 |
| Trna-asn | Not Available | Not Available | Positive | 4866553 - 4866628 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 4866658 - 4866734 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







