Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| binary cytotoxin component | ALQ79_02457 | Not Available | Negative | 338494 - 339504 | 37664.6 |
| hypothetical protein | ALQ79_02458 | Not Available | Negative | 339507 - 340727 | 45751.9 |
| hypothetical protein | ALQ79_02459 | Not Available | Positive | 341126 - 342346 | 45072.8 |
| alcohol dehydrogenase ii | ALQ79_02460 | Not Available | Positive | 342497 - 343645 | 40117.6 |
| acetyltransferase | ALQ79_02461 | Not Available | Positive | 343670 - 344116 | 16236.4 |
| pectin lyase | ALQ79_02462 | Not Available | Positive | 344240 - 345496 | 44751.9 |
| hypothetical protein | ALQ79_02463 | Not Available | Negative | 345637 - 346218 | 21696.1 |
| hypothetical protein | ALQ79_02464 | Not Available | Negative | 346330 - 346770 | 16503.6 |
| nickel/cobalt efflux protein rcna | ALQ79_02465 | Not Available | Negative | 346780 - 347658 | 31887.6 |
| hypothetical protein | ALQ79_02466 | Not Available | Negative | 347667 - 347960 | 11134.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







