Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uracil-dna glycosylase | ALQ79_02400 | Not Available | Negative | 4808615 - 4809328 | 26599.9 |
| putative lipoprotein | ALQ79_02401 | Not Available | Negative | 4809500 - 4809991 | 18313.1 |
| hypothetical protein | ALQ79_05077 | Not Available | Negative | 4810140 - 4810535 | 14362.6 |
| abc transporter periplasmic substrate-binding protein | ALQ79_02402 | Not Available | Positive | 4810554 - 4811621 | 38031.4 |
| abc transporter permease | ALQ79_02403 | Not Available | Positive | 4811649 - 4812464 | 29881.0 |
| abc transporter | ALQ79_02404 | Not Available | Positive | 4812461 - 4813243 | 28868.9 |
| hypothetical protein | ALQ79_02405 | Not Available | Positive | 4813977 - 4814594 | 22668.0 |
| urea amidolyase-like protein | ALQ79_05078 | Not Available | Positive | 4814638 - 4818396 | 135850.0 |
| allophanate hydrolase | ALQ79_02407 | Not Available | Positive | 4818432 - 4820246 | 64618.4 |
| hypothetical protein | ALQ79_02408 | Not Available | Positive | 4820389 - 4823694 | 122516.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







