Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar rod assembly protein/muramidase flgj | ALQ79_03606 | Not Available | Negative | 4789091 - 4790335 | 44228.9 |
| flagellar p-ring protein | ALQ79_03607 | Not Available | Negative | 4790346 - 4791455 | 38080.0 |
| flagellar l-ring protein | ALQ79_03608 | Not Available | Negative | 4791469 - 4792182 | 24857.5 |
| flagellar basal-body rod protein flgg | ALQ79_03609 | Not Available | Negative | 4792267 - 4793055 | 27465.2 |
| flagellar basal-body rod protein flgf | ALQ79_03610 | Not Available | Negative | 4793102 - 4793842 | 26122.2 |
| hypothetical protein | ALQ79_03611 | Not Available | Positive | 4794126 - 4794317 | 6782.31 |
| flagellar hook protein flge | ALQ79_05393 | Not Available | Negative | 4794318 - 4796078 | 61483.5 |
| hypothetical protein | ALQ79_02390 | Not Available | Negative | 4796497 - 4797006 | 19291.9 |
| integrase protein | ALQ79_02391 | Not Available | Negative | 4797649 - 4799082 | 52672.1 |
| l-aspartate oxidase | ALQ79_05075 | Not Available | Positive | 4799159 - 4799317 | 5926.34 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







