Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALQ79_102171 | Not Available | Positive | 4730926 - 4731162 | 8538.58 |
| serine 3-dehydrogenase | ALQ79_00427 | Not Available | Positive | 4731235 - 4731999 | 27352.6 |
| n-acylglucosamine 2-epimerase protein | ALQ79_00428 | Not Available | Negative | 4732042 - 4733256 | 45140.4 |
| 1-deoxy-d-xylulose-5-phosphate synthase | ALQ79_00429 | Not Available | Negative | 4733329 - 4735221 | 67874.8 |
| geranyltranstransferase | ALQ79_00430 | Not Available | Negative | 4735382 - 4736269 | 31566.6 |
| exodeoxyribonuclease 7 small subunit | ALQ79_00431 | Not Available | Negative | 4736266 - 4736511 | 9053.49 |
| cystathionine beta-lyase | ALQ79_04580 | Not Available | Negative | 4736614 - 4737792 | 42616.0 |
| hypothetical protein | ALQ79_00433 | Not Available | Negative | 4737866 - 4738882 | 38774.4 |
| putative s-transferase | ALQ79_00434 | Not Available | Negative | 4739083 - 4739982 | 33574.9 |
| o-antigen abc transporter permease | ALQ79_100378 | Not Available | Positive | 4740037 - 4741014 | 36250.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







