Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transglutaminase-like domain-containing protein | ALQ79_04579 | Not Available | Positive | 4720070 - 4720972 | 34102.8 |
| azurin | ALQ79_00419 | Not Available | Positive | 4721126 - 4721572 | 16119.5 |
| nh synthetase | ALQ79_00420 | Not Available | Negative | 4721814 - 4722641 | 29773.5 |
| nicotinate phosphoribosyltransferase | ALQ79_00421 | Not Available | Negative | 4722668 - 4723891 | 46664.4 |
| lysr family transcriptional regulator | ALQ79_00422 | Not Available | Negative | 4723991 - 4724896 | 34414.2 |
| high affinity branched-chain amino acid abc transporter periplasmic amino acid-binding protein | ALQ79_00423 | Not Available | Positive | 4725402 - 4726538 | 40047.7 |
| high-affinity branched-chain amino acid abc transporter | ALQ79_00424 | Not Available | Positive | 4726697 - 4727614 | 32749.2 |
| high-affinity branched-chain amino acid abc transporter permease brae | ALQ79_00425 | Not Available | Positive | 4727617 - 4728930 | 47298.5 |
| high affinity branched-chain amino acid abc transporter atp-binding protein | ALQ79_00426 | Not Available | Positive | 4728927 - 4729802 | 32361.3 |
| high affinity branched-chain amino acid abc transporter | ALQ79_100040 | Not Available | Positive | 4729799 - 4730515 | 26228.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







