Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna -methyltransferase rlmb | ALQ79_00408 | Not Available | Positive | 4704144 - 4704905 | 27200.1 |
| 30s ribosomal protein s6 | ALQ79_00409 | Not Available | Positive | 4705119 - 4705544 | 16313.8 |
| 30s ribosomal protein s18 | ALQ79_00410 | Not Available | Positive | 4705573 - 4705803 | 8917.85 |
| hypothetical protein | ALQ79_00411 | Not Available | Positive | 4705843 - 4706739 | 32274.9 |
| 50s ribosomal protein l9 | ALQ79_00412 | Not Available | Positive | 4706759 - 4707205 | 15487.4 |
| replicative dna helicase | ALQ79_00413 | Not Available | Positive | 4707323 - 4708723 | 51652.4 |
| hypothetical protein | ALQ79_04576 | Not Available | Positive | 4708825 - 4711146 | 86514.0 |
| hypothetical protein | ALQ79_04577 | Not Available | Negative | 4711198 - 4713960 | 101510.0 |
| transglutaminase-like domain-containing protein | ALQ79_00416 | Not Available | Positive | 4714216 - 4717494 | 123250.0 |
| hypothetical protein | ALQ79_00417 | Not Available | Positive | 4717566 - 4720079 | 93153.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







