Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna dimethylallyltransferase | ALQ79_00401 | Not Available | Positive | 4691117 - 4692088 | 35572.8 |
| gtpase hflx | ALQ79_00402 | Not Available | Positive | 4692453 - 4693754 | 48729.3 |
| hflk protein | ALQ79_100039 | Not Available | Positive | 4693827 - 4695050 | 44828.4 |
| protein hflc | ALQ79_00403 | Not Available | Positive | 4695050 - 4695919 | 33006.4 |
| atp phosphoribosyltransferase regulatory subunit | ALQ79_00404 | Not Available | Positive | 4696190 - 4697377 | 42819.3 |
| adenylosuccinate synthetase | ALQ79_00405 | Not Available | Positive | 4697432 - 4698724 | 46989.5 |
| methyl-accepting chemotaxis protein | ALQ79_00406 | Not Available | Positive | 4698896 - 4700830 | 68152.5 |
| Trna-leu | Not Available | Not Available | Positive | 4700955 - 4701041 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 4701202 - 4701288 | Not Available |
| ribonuclease r | ALQ79_00407 | Not Available | Positive | 4701514 - 4704147 | 97806.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







