Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine cleavage system h protein | ALQ79_02617 | Not Available | Negative | 4648909 - 4649295 | 13529.8 |
| aminomethyltransferase | ALQ79_02618 | Not Available | Negative | 4649339 - 4650499 | 42873.7 |
| iron abc transporter permease | ALQ79_02619 | Not Available | Negative | 4650574 - 4652190 | 58467.4 |
| iron abc transporter periplasmic iron-binding protein | ALQ79_05129 | Not Available | Negative | 4652461 - 4653510 | 38390.7 |
| cyclic nucleotide-binding protein | ALQ79_02621 | Not Available | Negative | 4653572 - 4654279 | 27020.1 |
| hypothetical protein | ALQ79_02622 | Not Available | Positive | 4654361 - 4654885 | 19020.8 |
| hypothetical protein | ALQ79_02623 | Not Available | Negative | 4654892 - 4656853 | 72739.8 |
| cytochrome c5 | ALQ79_02624 | Not Available | Negative | 4656968 - 4657291 | 11176.6 |
| helix-hairpin-helix dna-binding motif-containing protein | ALQ79_02625 | Not Available | Negative | 4657316 - 4657930 | 22241.7 |
| alanine racemase | ALQ79_02626 | Not Available | Negative | 4657989 - 4659131 | 41654.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







