Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative zinc uptake regulation protein | ALQ79_100068 | Not Available | Negative | 4616718 - 4617200 | 17107.6 |
| zinc abc transporter periplasmic zinc-binding protein | ALQ79_02591 | Not Available | Positive | 4617268 - 4618209 | 33991.6 |
| homoserine kinase | ALQ79_05119 | Not Available | Negative | 4618466 - 4619434 | 36096.4 |
| hypothetical protein | ALQ79_02593 | Not Available | Negative | 4619453 - 4619740 | 10755.0 |
| dna polymerase i | ALQ79_05120 | Not Available | Positive | 4619776 - 4622580 | 102314.0 |
| putative gtp-binding protein engb | ALQ79_02595 | Not Available | Negative | 4622822 - 4623457 | 23493.6 |
| hypothetical protein | ALQ79_101874 | Not Available | Positive | 4623592 - 4623759 | 6058.2 |
| thiol:disulfide interchange protein | ALQ79_02596 | Not Available | Positive | 4623752 - 4624396 | 23271.2 |
| endonuclease/exonuclease/phosphatase protein | ALQ79_02597 | Not Available | Positive | 4624406 - 4625281 | 32460.2 |
| ggdef domain-containing protein | ALQ79_100850 | Not Available | Positive | 4625278 - 4627338 | 76330.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







