Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter permease | ALQ79_02573 | Not Available | Positive | 4594851 - 4595498 | 23501.4 |
| phosphate abc transporter atp-binding protein | ALQ79_02574 | Not Available | Positive | 4595485 - 4596219 | 26786.8 |
| exopolyphosphatase | ALQ79_05113 | Not Available | Positive | 4596547 - 4598127 | 59111.2 |
| polyphosphate kinase | ALQ79_02575 | Not Available | Negative | 4598114 - 4600324 | 82682.1 |
| delta-aminolevulinic acid dehydratase | ALQ79_100924 | Not Available | Negative | 4600341 - 4601351 | 36886.1 |
| deda protein | ALQ79_02576 | Not Available | Positive | 4601583 - 4602245 | 24677.5 |
| enhancing lycopene biosynthesis protein 2 | ALQ79_02577 | Not Available | Positive | 4602453 - 4603121 | 23225.8 |
| radical sam domain-containing protein | ALQ79_02578 | Not Available | Positive | 4603245 - 4604303 | 38966.1 |
| carbonic anhydrase | ALQ79_02579 | Not Available | Positive | 4604470 - 4605249 | 28229.4 |
| sulfate transporter | ALQ79_02580 | Not Available | Positive | 4605354 - 4606886 | 53414.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







