Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALQ79_102792 | Not Available | Positive | 4585317 - 4585478 | 5649.78 |
| sn-glycerol-3-phosphate transporter | ALQ79_02566 | Not Available | Positive | 4585673 - 4587022 | 49864.0 |
| cation transport protein chac | ALQ79_02567 | Not Available | Negative | 4587035 - 4587703 | 24912.8 |
| cdp-6-deoxy-delta-3,4-glucoseen reductase | ALQ79_02568 | Not Available | Negative | 4587912 - 4588880 | 35329.2 |
| 3-polyprenyl-4-hydroxybenzoate carboxy-lyase | ALQ79_100019 | Not Available | Negative | 4588880 - 4590358 | 54955.8 |
| transcription termination factor rho | ALQ79_05111 | Not Available | Negative | 4590475 - 4591770 | 48409.8 |
| thioredoxin | ALQ79_100005 | Not Available | Negative | 4591966 - 4592313 | 12454.9 |
| gntr family transcriptional regulator | ALQ79_02570 | Not Available | Negative | 4592417 - 4593121 | 25361.4 |
| amino acid abc transporter, periplasmic amino acid-binding protein | ALQ79_02571 | Not Available | Positive | 4593371 - 4594156 | 27970.9 |
| amino acid abc transporter, permease protein | ALQ79_02572 | Not Available | Positive | 4594186 - 4594851 | 24562.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







