Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| h-ns histone | ALQ79_02431 | Not Available | Negative | 301622 - 302002 | 14233.0 |
| formyltetrahydrofolate deformylase | ALQ79_02432 | Not Available | Positive | 302360 - 303211 | 32530.9 |
| hypothetical protein | ALQ79_02433 | Not Available | Positive | 303290 - 303490 | 6999.99 |
| phosphate transporter | ALQ79_02434 | Not Available | Negative | 303540 - 305012 | 52627.7 |
| hypothetical protein | ALQ79_02435 | Not Available | Negative | 305218 - 305415 | 7798.17 |
| beta-ketoadipate pathway transcriptional regulator pcar | ALQ79_02436 | Not Available | Positive | 306245 - 307093 | 31099.6 |
| hypothetical protein | ALQ79_101302 | Not Available | Negative | 307173 - 307295 | 4822.58 |
| 3-oxoadipate:succinyl-coa transferase subunit a | ALQ79_02437 | Not Available | Positive | 307264 - 308151 | 32118.5 |
| 3-oxoadipate:succinyl-coa transferase, b subunit | ALQ79_02438 | Not Available | Positive | 308151 - 308930 | 27096.4 |
| beta-ketoadipyl coa thiolase | ALQ79_02439 | Not Available | Positive | 308930 - 310129 | 41773.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







