Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, rpir family | ALQ79_04229 | Not Available | Positive | 250357 - 251223 | 31020.6 |
| hypothetical protein | ALQ79_05542 | Not Available | Positive | 251329 - 251550 | 8701.17 |
| lysr family transcriptional regulator | ALQ79_04230 | Not Available | Negative | 251504 - 252454 | 35793.6 |
| putative acetyl-coa carboxylase, biotin carboxylase | ALQ79_05543 | Not Available | Positive | 252580 - 254031 | 53281.0 |
| pyruvate carboxylase subunit b | ALQ79_05545 | Not Available | Positive | 253914 - 255851 | 70800.3 |
| acetyltransferase | ALQ79_04233 | Not Available | Negative | 256004 - 256474 | 17526.9 |
| acetyltransferase | ALQ79_04234 | Not Available | Negative | 256487 - 256933 | 17001.1 |
| transcriptional regulator | ALQ79_04235 | Not Available | Negative | 256930 - 257574 | 23537.0 |
| gntr family transcriptional regulator | ALQ79_04236 | Not Available | Positive | 257658 - 259220 | 56761.3 |
| yeee/yede protein | ALQ79_04237 | Not Available | Positive | 259274 - 260485 | 42136.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







