Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-4-dehydrorhamnose 3,5-epimerase | ALQ79_00220 | Not Available | Positive | 4056595 - 4057140 | 20475.1 |
| hypothetical protein | ALQ79_04541 | Not Available | Negative | 4057188 - 4057301 | 3915.63 |
| sensor histidine kinase | ALQ79_04540 | Not Available | Positive | 4057305 - 4059122 | 67220.1 |
| sigma-54 dependent dna-binding response regulator | ALQ79_00222 | Not Available | Positive | 4059119 - 4060504 | 50423.4 |
| hypothetical protein | ALQ79_102933 | Not Available | Positive | 4060961 - 4061101 | 4971.92 |
| 3',5'-bisphosphate nucleotidase | ALQ79_00223 | Not Available | Negative | 4061340 - 4062182 | 30284.9 |
| mutt/nudix protein | ALQ79_00224 | Not Available | Negative | 4062179 - 4062745 | 20821.0 |
| hydrolase, had-superfamily, subfamily ia, variant 3 | ALQ79_00225 | Not Available | Positive | 4062842 - 4063519 | 25882.0 |
| transcriptional regulator, lysr family | ALQ79_00226 | Not Available | Positive | 4063555 - 4064442 | 33008.0 |
| formate dehydrogenase family accessory protein fdhd | ALQ79_00227 | Not Available | Positive | 4064546 - 4065382 | 29773.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







