Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase, m20/m25/m40 protein | ALQ79_01109 | Not Available | Positive | 4017412 - 4018707 | 46211.9 |
| acetyltransferase | ALQ79_01110 | Not Available | Positive | 4018825 - 4019328 | 19054.9 |
| hypothetical protein | ALQ79_102370 | Not Available | Positive | 4019404 - 4019601 | 7438.14 |
| amino acid adenylation | ALQ79_01111 | Not Available | Positive | 4019656 - 4023696 | 146397.0 |
| putative phosphopantetheinyl transferase | ALQ79_102466 | Not Available | Positive | 4023693 - 4024325 | 22558.2 |
| hypothetical protein | ALQ79_102779 | Not Available | Positive | 4024322 - 4024459 | 5040.81 |
| arac family transcriptional regulator | ALQ79_01112 | Not Available | Positive | 4024425 - 4025261 | 31701.8 |
| amino acid transporter lyse | ALQ79_01113 | Not Available | Positive | 4025281 - 4025886 | 21650.3 |
| formate transporter | ALQ79_01114 | Not Available | Negative | 4026061 - 4026876 | 28340.3 |
| hypothetical protein | ALQ79_100340 | Not Available | Positive | 4027140 - 4027409 | 9850.23 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







