Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laci family transcriptional regulator | ALQ79_01081 | Not Available | Positive | 3982393 - 3983412 | 37271.9 |
| fe3+ abc-type transport system, periplasmic substrate-binding protein | ALQ79_100463 | Not Available | Positive | 3983168 - 3984397 | 44406.4 |
| binding-protein dependent transport system inner membrane protein | ALQ79_01082 | Not Available | Positive | 3984397 - 3985266 | 30069.5 |
| abc transporter atp-binding protein | ALQ79_100101 | Not Available | Positive | 3986054 - 3987085 | 37000.8 |
| 3',5'-cyclic adenosine monophosphate phosphodiesterase cpda | ALQ79_01083 | Not Available | Positive | 3987110 - 3987943 | 31062.1 |
| tat pathway signal sequence domain-containing protein | ALQ79_04750 | Not Available | Negative | 3988216 - 3990186 | 70951.0 |
| helix-turn-helix, fis-type:molybdenum-binding protein | ALQ79_04751 | Not Available | Negative | 3990214 - 3991110 | 32401.0 |
| competence protein comf | ALQ79_01086 | Not Available | Negative | 3991117 - 3991851 | 27621.6 |
| biotin synthase | ALQ79_01087 | Not Available | Positive | 3991941 - 3992999 | 38646.3 |
| 8-amino-7-oxononanoate synthase | ALQ79_01088 | Not Available | Positive | 3993064 - 3994254 | 42489.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







