Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sarcosine oxidase, delta subunit | ALQ79_01065 | Not Available | Negative | 3958163 - 3958459 | 11435.4 |
| sarcosine oxidase, beta subunit | ALQ79_01066 | Not Available | Negative | 3958475 - 3959725 | 45312.2 |
| serine hydroxymethyltransferase | ALQ79_01067 | Not Available | Negative | 3959743 - 3960993 | 44806.2 |
| hypothetical protein | ALQ79_100707 | Not Available | Positive | 3961089 - 3961211 | 4415.17 |
| glycine/betaine/l-proline abc transporter, atp-binding subunit | ALQ79_100191 | Not Available | Negative | 3961263 - 3962441 | 43410.8 |
| binding-protein-dependent transport (system) inner membrane component | ALQ79_01068 | Not Available | Negative | 3962438 - 3963283 | 30457.3 |
| glycine betaine/l-proline abc transporter periplasmic substrate-binding protein | ALQ79_01069 | Not Available | Negative | 3963351 - 3964298 | 34435.4 |
| hypothetical protein | ALQ79_04740 | Not Available | Positive | 3964458 - 3964778 | 11513.0 |
| arac family transcriptional regulator | ALQ79_01070 | Not Available | Positive | 3965076 - 3966182 | 41103.8 |
| methyl-accepting chemotaxis protein | ALQ79_04741 | Not Available | Negative | 3966318 - 3967943 | 58568.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







