Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase protein | ALQ79_03456 | Not Available | Positive | 3944630 - 3945823 | 43146.9 |
| s/n-oxide reductase, molybdopterin guanine dinucleotide-containing | ALQ79_05360 | Not Available | Negative | 3945831 - 3948200 | 86975.2 |
| aliphatic sulfonate abc transporter periplasmic substrate-binding protein | ALQ79_03458 | Not Available | Negative | 3948130 - 3949146 | 36231.4 |
| lysr family transcriptional regulator | ALQ79_05361 | Not Available | Negative | 3949238 - 3950200 | 35870.2 |
| cupin domain-containing protein | ALQ79_03460 | Not Available | Positive | 3950335 - 3951057 | 26397.0 |
| hypothetical protein | ALQ79_03461 | Not Available | Positive | 3951184 - 3951645 | 16846.9 |
| zinc-containing alcohol dehydrogenase super protein | ALQ79_100480 | Not Available | Negative | 3952110 - 3953411 | 45646.9 |
| formyltetrahydrofolate deformylase | ALQ79_100062 | Not Available | Negative | 3953359 - 3954216 | 32119.4 |
| sarcosine oxidase, gamma subunit | ALQ79_01063 | Not Available | Negative | 3954462 - 3955094 | 23063.7 |
| sarcosine oxidase, alpha subunit | ALQ79_04736 | Not Available | Negative | 3955146 - 3958289 | 114229.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







