Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative lipoprotein | ALQ79_04295 | Not Available | Negative | 3890657 - 3891520 | 33547.1 |
| hypothetical protein | ALQ79_04296 | Not Available | Negative | 3891590 - 3892318 | 26376.9 |
| hypothetical protein | ALQ79_04297 | Not Available | Negative | 3892463 - 3892975 | 18829.4 |
| hypothetical protein | ALQ79_04298 | Not Available | Negative | 3893143 - 3893331 | 6409.79 |
| nucleic acid binding protein | ALQ79_04299 | Not Available | Positive | 3893638 - 3894474 | 31036.3 |
| hypothetical protein | ALQ79_04300 | Not Available | Positive | 3894513 - 3894914 | 14309.9 |
| hypothetical protein | ALQ79_101110 | Not Available | Negative | 3894993 - 3895580 | 22371.3 |
| mismatched base pair and cruciform dna recognition protein | ALQ79_04301 | Not Available | Positive | 3895619 - 3895810 | 6473.7 |
| ribonuclease bn | ALQ79_04302 | Not Available | Positive | 3896037 - 3897005 | 35517.1 |
| peptide deformylase | ALQ79_04303 | Not Available | Positive | 3897052 - 3897591 | 19974.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







