Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| major facilitator transporter | ALQ79_04287 | Not Available | Positive | 3879162 - 3880361 | 41459.7 |
| hypothetical protein | ALQ79_05559 | Not Available | Positive | 3880374 - 3881447 | 39426.2 |
| hypothetical protein | ALQ79_04289 | Not Available | Negative | 3881530 - 3882330 | 29718.1 |
| regulatory protein, lysr:lysr, substrate-binding | ALQ79_04290 | Not Available | Positive | 3882413 - 3883318 | 33190.4 |
| hypothetical protein | ALQ79_04291 | Not Available | Negative | 3883338 - 3883718 | 14128.0 |
| omp85 family outer membrane protein | ALQ79_05561 | Not Available | Negative | 3883872 - 3886712 | 104252.0 |
| dna-binding response regulator cpxr | ALQ79_04293 | Not Available | Positive | 3886461 - 3887150 | 25764.2 |
| signal transduction histidine kinase | ALQ79_100639 | Not Available | Positive | 3887147 - 3888397 | 46232.9 |
| helicase | ALQ79_100379 | Not Available | Positive | 3888542 - 3889903 | 49583.5 |
| hypothetical protein | ALQ79_04294 | Not Available | Positive | 3890100 - 3890402 | 10997.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







