Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALQ79_03183 | Not Available | Negative | 3866458 - 3866802 | 12824.6 |
| glycerol-3-phosphate dehydrogenase | ALQ79_03184 | Not Available | Negative | 3866828 - 3867853 | 36609.7 |
| response regulator receiver:atp-binding region, atpase-like:histidine kinase | ALQ79_03185 | Not Available | Positive | 3868139 - 3870076 | 71060.7 |
| 3-hydroxydecanoyl- dehydratase | ALQ79_03186 | Not Available | Positive | 3870298 - 3870813 | 18776.7 |
| 3-oxoacyl- synthase i | ALQ79_03187 | Not Available | Positive | 3870824 - 3872047 | 43162.5 |
| hypothetical protein | ALQ79_101690 | Not Available | Negative | 3872782 - 3874665 | 71375.2 |
| phage integrase protein | ALQ79_04283 | Not Available | Negative | 3874610 - 3876094 | 56619.2 |
| mscs mechanosensitive ion channel | ALQ79_05558 | Not Available | Negative | 3876165 - 3877118 | 35461.8 |
| hypothetical protein | ALQ79_04285 | Not Available | Positive | 3877034 - 3878146 | 40060.3 |
| regulatory protein, lysr:lysr, substrate-binding | ALQ79_04286 | Not Available | Negative | 3878162 - 3879055 | 32979.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







