Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | ALQ79_02362 | Not Available | Negative | 3793674 - 3795650 | 70096.7 |
| lysr family transcriptional regulator | ALQ79_02363 | Not Available | Negative | 3795835 - 3796755 | 34624.9 |
| multidrug efflux protein nora | ALQ79_02364 | Not Available | Positive | 3796911 - 3798290 | 48512.0 |
| ggdef domain/eal domain-containing protein | ALQ79_05061 | Not Available | Negative | 3798303 - 3799757 | 54205.6 |
| diguanylate cye | ALQ79_101912 | Not Available | Negative | 3799764 - 3799967 | 7504.02 |
| atp-dependent dna helicase rep | ALQ79_02366 | Not Available | Positive | 3800173 - 3802182 | 76604.6 |
| xanthine phosphoribosyltransferase | ALQ79_02367 | Not Available | Positive | 3802236 - 3802805 | 20171.5 |
| sigma-54 dependent transcriptional regulator | ALQ79_05062 | Not Available | Negative | 3803083 - 3804498 | 51683.0 |
| pyridine nucleotide-disulfide oxidoreductase | ALQ79_02370 | Not Available | Positive | 3805586 - 3806842 | 45221.5 |
| sulfate/thiosulfate import atp-binding protein cysa | ALQ79_02371 | Not Available | Negative | 3807768 - 3808748 | 36784.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







