Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid transporter lyse | ALQ79_03730 | Not Available | Positive | 3770960 - 3771613 | 23090.6 |
| tetr family transcriptional regulator | ALQ79_03731 | Not Available | Positive | 3771769 - 3772431 | 25841.0 |
| lipoprotein | ALQ79_03732 | Not Available | Positive | 3772447 - 3773157 | 26277.8 |
| hypothetical protein | ALQ79_03733 | Not Available | Positive | 3773178 - 3773738 | 20940.1 |
| aspartate-semialdehyde dehydrogenase | ALQ79_03734 | Not Available | Positive | 3773824 - 3774834 | 35306.2 |
| lysm domain-containing protein | ALQ79_03735 | Not Available | Positive | 3774944 - 3777775 | 99114.8 |
| trna pseudouridine synthase a | ALQ79_03736 | Not Available | Positive | 3777907 - 3778761 | 31819.3 |
| n-anthranilate isomerase | ALQ79_03737 | Not Available | Positive | 3778823 - 3779443 | 21903.3 |
| acetyl-coenzyme a carboxylase carboxyl transferase subunit beta | ALQ79_03738 | Not Available | Positive | 3779693 - 3780613 | 33541.4 |
| dihydrofolate synthase | ALQ79_101549 | Not Available | Positive | 3780610 - 3781914 | 46856.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







