Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylenolpyruvoylglucosamine reductase | ALQ79_03711 | Not Available | Positive | 3751756 - 3752775 | 37368.9 |
| ribonuclease e | ALQ79_05413 | Not Available | Negative | 3753031 - 3756426 | 124499.0 |
| hypothetical protein | ALQ79_100674 | Not Available | Negative | 3756759 - 3756893 | 5248.4 |
| pseudouridine synthase | ALQ79_03713 | Not Available | Positive | 3757096 - 3758052 | 35532.6 |
| hydrolase, had-superfamily, subfamily ia, variant 1 | ALQ79_03714 | Not Available | Positive | 3758042 - 3758704 | 24509.2 |
| signal peptide peptidase sppa, 36k type | ALQ79_03715 | Not Available | Positive | 3758729 - 3759727 | 36382.2 |
| maf-like protein | ALQ79_05415 | Not Available | Negative | 3759783 - 3760436 | 23850.6 |
| metal-binding protein | ALQ79_03717 | Not Available | Positive | 3760468 - 3760995 | 19291.1 |
| 50s ribosomal protein l32 | ALQ79_03718 | Not Available | Positive | 3761009 - 3761191 | 6770.98 |
| phosphate acyltransferase | ALQ79_03719 | Not Available | Positive | 3761196 - 3762218 | 35582.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







