Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter, periplasmic substrate-binding protein | ALQ79_01829 | Not Available | Positive | 3706209 - 3707276 | 38465.8 |
| hypothetical protein | ALQ79_01830 | Not Available | Positive | 3707355 - 3708161 | 30253.8 |
| putative polyamine abc transporter, permease protein | ALQ79_100095 | Not Available | Positive | 3708158 - 3709000 | 31141.5 |
| polyamine abc transporter, atp-binding protein | ALQ79_01831 | Not Available | Positive | 3709786 - 3710775 | 36394.1 |
| had family hydrolase | ALQ79_01832 | Not Available | Positive | 3710886 - 3711539 | 24008.6 |
| oxidoreductase, zinc-binding protein | ALQ79_01833 | Not Available | Negative | 3711559 - 3712578 | 35710.1 |
| tail-specific protease | ALQ79_01834 | Not Available | Positive | 3712626 - 3714740 | 78647.0 |
| eal/ggdef domain-containing protein | ALQ79_01835 | Not Available | Positive | 3714798 - 3716630 | 68375.2 |
| hypothetical protein | ALQ79_01836 | Not Available | Negative | 3716767 - 3717138 | 13828.5 |
| cro/ci family transcriptional regulator | ALQ79_01837 | Not Available | Negative | 3717135 - 3717476 | 12114.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







