Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative trap dicarboxylate transporter, dctq subunit | ALQ79_00578 | Not Available | Positive | 3624586 - 3625152 | 20614.9 |
| trap dicarboxylate transporter, dctm subunit | ALQ79_00579 | Not Available | Positive | 3625153 - 3626433 | 45184.9 |
| putative membrane protein | ALQ79_00580 | Not Available | Positive | 3626510 - 3627499 | 35057.9 |
| aldose 1-epimerase protein | ALQ79_00581 | Not Available | Positive | 3627474 - 3628343 | 31747.6 |
| hypothetical protein | ALQ79_101561 | Not Available | Positive | 3628587 - 3628844 | 9306.2 |
| putative rna polymerase sigma factor sigw | ALQ79_00582 | Not Available | Positive | 3629184 - 3629792 | 23625.3 |
| transcriptional activator chrr | ALQ79_00583 | Not Available | Positive | 3629792 - 3630454 | 24121.3 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | ALQ79_00584 | Not Available | Negative | 3630476 - 3631732 | 43679.4 |
| sensory box protein | ALQ79_00585 | Not Available | Negative | 3631829 - 3632311 | 18410.0 |
| chemotaxis protein chec -- inhibitor of mcp methylation | ALQ79_100317 | Not Available | Negative | 3632315 - 3633319 | 35953.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







