Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALQ79_200519 | Not Available | Negative | 3459470 - 3459883 | 15464.4 |
| hypothetical protein | ALQ79_200034 | Not Available | Negative | 3459906 - 3460136 | 8586.25 |
| hypothetical protein | ALQ79_200584 | Not Available | Positive | 3460341 - 3460772 | 15530.7 |
| hypothetical protein | ALQ79_02261 | Not Available | Positive | 3462845 - 3463540 | 25381.4 |
| dolichyl-phosphate-mannose-protein mannosyltransferase family | ALQ79_02262 | Not Available | Positive | 3463678 - 3465210 | 55870.1 |
| udp-glucose 6-dehydrogenase | ALQ79_02263 | Not Available | Negative | 3465245 - 3466639 | 51949.1 |
| putative 4-amino-4-deoxy-l-arabinose-phosphoundecaprenol flippase subunit arnf | ALQ79_02264 | Not Available | Negative | 3466617 - 3467051 | 15870.5 |
| putative 4-amino-4-deoxy-l-arabinose-phosphoundecaprenol flippase subunit arne | ALQ79_100561 | Not Available | Negative | 3467048 - 3467392 | 12674.2 |
| undecaprenyl phosphate-alpha-4-amino-4-deoxy-l-arabinose arabinosyl transferase | ALQ79_02265 | Not Available | Negative | 3467389 - 3469038 | 61728.0 |
| putative 4-deoxy-4-formamido-l-arabinose-phosphoundecaprenol deformylase arnd | ALQ79_02266 | Not Available | Negative | 3469038 - 3469919 | 32746.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







