Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na antiporter nhaa | ALQ79_00170 | Not Available | Negative | 3410534 - 3411712 | 40785.3 |
| peptide abc transporter periplasmic peptide-binding protein | ALQ79_00171 | Not Available | Negative | 3411870 - 3413384 | 56103.1 |
| peptide abc transporter atp-binding protein | ALQ79_04532 | Not Available | Negative | 3413436 - 3414455 | 36743.0 |
| oligopeptide transport atp-binding protein | ALQ79_00173 | Not Available | Negative | 3414413 - 3415405 | 35327.3 |
| peptide abc transporter permease | ALQ79_00174 | Not Available | Negative | 3415402 - 3416265 | 31385.3 |
| peptide abc transporter permease | ALQ79_00175 | Not Available | Negative | 3416262 - 3417209 | 34429.4 |
| transcriptional regulator, luxr family, autoinducer-regulated | ALQ79_00176 | Not Available | Positive | 3417549 - 3418313 | 28245.8 |
| l-amino-acid amidase | ALQ79_00177 | Not Available | Positive | 3418408 - 3419331 | 34267.7 |
| regulatory protein, lysr:lysr, substrate-binding | ALQ79_05362 | Not Available | Positive | 3420484 - 3421395 | 33745.6 |
| 4-hydroxy-2-oxovalerate aldolase domain-containing protein | ALQ79_03463 | Not Available | Positive | 3421673 - 3422701 | 36593.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







