Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short chain dehydrogenase | ALQ79_03895 | Not Available | Negative | 3348704 - 3349522 | 28719.8 |
| hypothetical protein | ALQ79_03896 | Not Available | Negative | 3349540 - 3350019 | 17725.4 |
| alginate biosynthesis protein alga | ALQ79_03897 | Not Available | Negative | 3350157 - 3351608 | 53542.1 |
| alginate biosynthesis protein algf | ALQ79_03898 | Not Available | Negative | 3351727 - 3352395 | 23372.9 |
| alginate biosynthesis protein algj | ALQ79_03899 | Not Available | Negative | 3352408 - 3353583 | 43137.0 |
| alginate biosynthesis protein algi | ALQ79_03900 | Not Available | Negative | 3353594 - 3355150 | 58639.6 |
| alginate lyase | ALQ79_03901 | Not Available | Negative | 3355342 - 3356478 | 42510.4 |
| alginate biosynthesis protein algx | ALQ79_03902 | Not Available | Negative | 3356487 - 3357944 | 54111.1 |
| alginate biosynthesis protein algg | ALQ79_100001 | Not Available | Negative | 3357941 - 3359578 | 60905.0 |
| alginate biosynthesis protein alge | ALQ79_03903 | Not Available | Negative | 3359578 - 3361059 | 54849.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







