Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALQ79_03887 | Not Available | Positive | 3337421 - 3337768 | 12212.5 |
| hypothetical protein | ALQ79_03888 | Not Available | Positive | 3337720 - 3339330 | 59380.9 |
| iron uptake protein | ALQ79_100369 | Not Available | Positive | 3339246 - 3339662 | 14922.7 |
| arac family transcriptional regulator | ALQ79_03889 | Not Available | Negative | 3339651 - 3340526 | 32354.8 |
| hypothetical protein | ALQ79_03890 | Not Available | Positive | 3340663 - 3341565 | 32566.9 |
| d-isomer specific 2-hydroxyacid dehydrogenase protein | ALQ79_03891 | Not Available | Negative | 3341602 - 3342576 | 35436.6 |
| lysr family transcriptional regulator | ALQ79_03892 | Not Available | Negative | 3342664 - 3343611 | 34554.4 |
| nodt family outer membrane efflux lipoprotein | ALQ79_03893 | Not Available | Positive | 3343795 - 3345276 | 53216.4 |
| fusaric acid resistance protein | ALQ79_100853 | Not Available | Positive | 3345273 - 3347459 | 80883.0 |
| hlyd family secretion protein | ALQ79_03894 | Not Available | Positive | 3347673 - 3348533 | 31936.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







