Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helicase domain protein | ALQ79_100770 | Not Available | Negative | 3324985 - 3327477 | 92165.0 |
| histidine transport atp-binding protein | ALQ79_03062 | Not Available | Negative | 3328079 - 3328843 | 28076.1 |
| succinylglutamate desuccinylase/aspartoacylase protein | ALQ79_03063 | Not Available | Negative | 3328853 - 3329971 | 40525.5 |
| amino acid abc transporter, permease protein | ALQ79_03064 | Not Available | Negative | 3329984 - 3330694 | 26680.0 |
| amino acid abc transporter permease | ALQ79_03065 | Not Available | Negative | 3330691 - 3331419 | 26622.1 |
| amino acid abc transporter periplasmic amino acid-binding protein | ALQ79_03066 | Not Available | Negative | 3331500 - 3332282 | 27871.4 |
| atp-dependent dna ligase | ALQ79_03067 | Not Available | Negative | 3332626 - 3334329 | 63672.1 |
| mrna 3''''-end processing factor | ALQ79_03068 | Not Available | Negative | 3334326 - 3335372 | 38288.1 |
| sigma factor regulatory protein fecr/pupr family | ALQ79_03885 | Not Available | Negative | 3335744 - 3336721 | 35350.3 |
| rna polymerase sigma-70 protein | ALQ79_03886 | Not Available | Negative | 3336718 - 3337314 | 22291.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







