Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| luxr family transcriptional regulator | ALQ79_100057 | Not Available | Positive | 3316625 - 3317293 | 24467.3 |
| hypothetical protein | ALQ79_03054 | Not Available | Negative | 3317453 - 3317635 | 6948.85 |
| endonuclease iii | ALQ79_03055 | Not Available | Negative | 3317742 - 3318380 | 23826.8 |
| iron-sulfur cluster-binding protein | ALQ79_03056 | Not Available | Negative | 3318377 - 3319249 | 31377.2 |
| methionine--trna ligase | ALQ79_03057 | Not Available | Negative | 3319379 - 3321427 | 75451.8 |
| atp-binding protein, mrp/nbp35 family | ALQ79_03058 | Not Available | Positive | 3321699 - 3322691 | 35157.6 |
| cold-shock protein | ALQ79_03059 | Not Available | Negative | 3322842 - 3323051 | 7727.11 |
| hypothetical protein | ALQ79_102637 | Not Available | Positive | 3323240 - 3323374 | 5277.61 |
| deoxycytidine triphosphate deaminase | ALQ79_03060 | Not Available | Positive | 3323371 - 3323937 | 21249.3 |
| hypothetical protein | ALQ79_03061 | Not Available | Negative | 3324332 - 3324988 | 23986.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







